After escaping from Jin’s Puzzle of Fools, Melancholy invites Kaito and his friends over to her house. Freecell hopes to use this unexpected opportunity to mend their relationship, but he has a long and bumpy road ahead of him...

Bent on vengeance, Melancholy becomes a Master Brain. Freecell wants to leave the world of puzzles behind, but Melancholy won’t let him as she drags him into a Puzzle of Fools. Can Kaito and Gammon save him?

Gammon is about to blow a gasket when he learns that he has the lowest bounty now. He’s desperate for a chance to boost his bounty, but he may have gotten more than he bargained for when Demolition Man challenges him to a puzzle battle.

Jin once told Rook that “Puzzles are chains. Puzzles are also mirrors.” Unsure how to interpret those words, Rook jumps on the chance to challenge a Puzzle of Fools that Jin once fought in the hopes of gaining insight into his heart...

Kaito and Raetsel are busy arguing over who knows the “real” Jin while Cubik fights Dr. Theorem in a puzzle battle. The puzzle is math based, so it should be right up Cubik’s ally. But he seems to be having a hard time solving it...

Tensions grow tight when Kaito is unable to prove to Gammon that Jin is trustworthy. Raetsel decides that this is the perfect time to transfer to their school. And suddenly Jin challenges Kaito to a puzzle battle...!

It’s puzzle time! Kaito, Nonoha and Rook must find the right exit before they get turned into pancakes. At Root Gakuen, Gammon, Ana and Cubik have to defeat Whodunit’s color-coded number game or get toasted alive!

FreeCell’s final puzzle traps Kaito in a never ending game. As his friends call out to him, their voices can’t reach as Freecell and Kaito has entered a world of their own.

Nonoha has been taken by Freecell for a “talk”, during their conversation, Nonoha learns more about FreeCell’s relationship with his mother and the puzzle she left him.

The remaining members of the Orpheus Order team up with the POG in effort to take down Klondike.

Kaito finally gets to challenge the elusive Mr. Klondike, but that too is all a part of his plan.

Even after learning everything, Mizerka and Doubt challenge Daimon to one last puzzle to the death.

Kaito can’t beat Freecell has he is, he must train. But the only way to train is to solve more Puzzle of Fools.

Nonoha and Freecell team up to rescue Kaito who has been knocked unconscious after the cave in. In the process, Nonoha pushes Freecell to her what happened in the past.